Reference

• Public API
  • AssociationResult
  • CalibrationResult
  • ConvergenceReport
  • DenseREMLOracle
  • convergence_statistics()
  • EvolutionaryLmmOps
  • EvolutionaryPrior
  • FitDiagnostics
  • FitResult
  • FullPrior
  • SimplifiedPrior
  • GrgSimulation
  • VariantData
  • allele_frequency_q()
  • association()
  • association_summary()
  • calibrate_association()
  • select_calibration_variants()
  • TestVariantStats
  • dense_variant_data()
  • exact_average_information()
  • exact_reml_score()
  • fit_dense_reml()
  • fit_evolutionary_bolt_lmm()
  • fit_evolutionary_bolt()
  • fit_evolutionary_reml()
  • fit_evolutionary_lmm()
  • fit_reml()
  • exact_reml_loglikelihood()
  • profiled_average_information()
  • haseman_elston_initialization()
  • grg_variant_data()
  • loco_solve()
  • loco_solutions()
  • predict_blup()
  • prior_from_coordinates()
  • prior_from_parameters()
  • restricted_log_likelihood()
  • sample_allele_frequencies()
  • simulate_grg_lmm()
  • MultiComponentFit
  • MultiComponentOps
  • MultiComponentPrior
  • fit_multicomponent_reml()
  • profiled_reml_objective()
  • CollapsedVariants
  • MoMResult
  • collapse_mac()
  • flat_prior()
  • joint_mom_initialization()
  • fit_rare_effect_baseline()
  • RareEffectBaselineResult
  • rare_effect_mom_ratio()
  • HeritabilityEstimates
  • GeneComponentReport
  • FitReport
  • ProfileLikelihood
  • boundary_lrt_pvalue()
  • delta_method_se()
  • genic_variance_by_maf()
  • heritability_conventions()
  • gene_component_report()
  • fit_genes()
  • fit_report()
  • fit_tau_profiles()
  • fit_parameter_profiles()
  • profile_tau()
  • Priors
  • Operators and data boundaries
  • Fitting results
  • Association and calibration