Public API ========== The top-level ``evo_lmm`` namespace contains the supported public classes and functions. The signatures below are generated directly from the installed package. .. automodule:: evo_lmm :members: :imported-members: :show-inheritance: Priors ------ .. autoclass:: evo_lmm.SimplifiedPrior :members: :show-inheritance: :noindex: .. autoclass:: evo_lmm.FullPrior :members: :show-inheritance: :noindex: Operators and data boundaries ----------------------------- .. autoclass:: evo_lmm.EvolutionaryLmmOps :members: :show-inheritance: :noindex: .. autoclass:: evo_lmm.VariantData :members: :show-inheritance: :noindex: Fitting results --------------- .. autoclass:: evo_lmm.FitResult :members: :show-inheritance: :noindex: .. autoclass:: evo_lmm.FitDiagnostics :members: :show-inheritance: :noindex: .. autoclass:: evo_lmm.AssociationResult :members: :show-inheritance: :noindex: Association and calibration --------------------------- .. autoclass:: evo_lmm.CalibrationResult :members: :show-inheritance: :noindex: .. autoclass:: evo_lmm.TestVariantStats :members: :show-inheritance: :noindex: .. autofunction:: evo_lmm.calibrate_association :noindex: .. autofunction:: evo_lmm.select_calibration_variants :noindex: .. autofunction:: evo_lmm.association :noindex: .. autofunction:: evo_lmm.association_summary :noindex: